PCDH11Y

GENE INFORMATION

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Gene name

PCDH11Y (HGNC Symbol)

Synonyms

PCDH22, PCDHY

Description

Protocadherin 11 Y-linked (HGNC Symbol)

Entrez gene summary

This gene belongs to the protocadherin family, a subfamily of the cadherin superfamily. The encoded protein consists of an extracellular domain containing seven cadherin repeats, a transmembrane domain, and a cytoplasmic tail that differs from those of the classical cadherins. This gene is located on the Y chromosome in a block of X/Y homology and is very closely related to its paralog on the X chromosome. The protein is thought to play a role in cell-cell recognition during development of the central nervous system. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2013]

Chromosome

Y

Cytoband

p11.2

Chromosome location (bp)

5000226 - 5742224

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000099715 (version 78.38)

Entrez gene

83259

UniProt

Q9BZA8 (UniProt - Evidence at protein level)

neXtProt

NX_Q9BZA8

Antibodypedia

PCDH11Y antibodies
 

PROTEIN VIEW

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PCDH11Y-001
 
PCDH11Y-002
 
PCDH11Y-003
 
PCDH11Y-004
 
PCDH11Y-005
 
PCDH11Y-007
 
 
 
 
 

PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

PCDH11Y-001 ENSP00000383306
ENST00000400457
Q9BZA8
Show all »
Show » Show » 1340 146.8 Yes 2
PCDH11Y-002 ENSP00000330552
ENST00000333703
Q9BZA8
Show all »
Show » Show » 1037 114.7 No 1
PCDH11Y-003 ENSP00000355419
ENST00000362095
Q9BZA8
Show all »
Show » Show » 1048 115.9 Yes 2
PCDH11Y-004 ENSP00000482115
ENST00000622698
Q9BZA8
Show all »
Show » Show » 1037 114.7 No 1
PCDH11Y-005 ENSP00000215473
ENST00000215473
Q9BZA8
Show all »
Show » Show » 1053 116.4 Yes 2
PCDH11Y-007 ENSP00000478548
ENST00000621505
Show » 77 8.5 No 0